Protein Design and Engineering Tools and Services

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Molecular Visualization

MolX 3D Molecular Viewer

MolX is more than just a molecular viewer. While it incorporates familiar functionalities from popular desktop applications, MolX transcends single application and desktop limitations by offering a cloud-based platform. This ensures seamless connectivity to the cloud, unlocking endless possibilities for integration.

Molecular feature localization
Sequence Manipulation

Protein Editor and Sequence Visualization

Genophore Protein Sequence Viewer and Editor – your all-in-one solution for visualizing, analyzing, and editing protein sequences. Our intuitive interface, advanced visualization options, and powerful annotation tools make it easy for researchers and scientists to explore and modify protein sequences with precision. Whether you are studying functional motifs, editing sequences, or analyzing structural properties, Genophore provides a seamless and user-friendly experience to support protein engineering needs.

DNA Sequence Design and Alignment Tools

Genophore's Powerful Tools for Protein Design

Molecular feature localization
Sequence Manipulation

Protein Editor and Sequence Visualization

Genophore Protein Sequence Viewer and Editor – your all-in-one solution for visualizing, analyzing, and editing protein sequences. Our intuitive interface, advanced visualization options, and powerful annotation tools make it easy for researchers and scientists to explore and modify protein sequences with precision. Whether you are studying functional motifs, editing sequences, or analyzing structural properties, Genophore provides a seamless and user-friendly experience to support protein engineering needs.

Sequence Editor and Codon optimization
Protein Expression

Fine-tuned Codon Optimization

Genophore's DNA sequence editor and codon optimization tool make it easy to automate sequence engineering tasks including bulk operations.

Have a full control of your gene expression by optimizing codon usage for various host organisms. This tool us designed for researchers and biotechnologists and offers comprehensive features for efficient and fine-tuned sequence optimization. Try Now

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Sequence Comparison

Multiple Sequence Alignment

Introducing our powerful cloud-based protein and DNA sequence alignment tools, a powerful component of the Genophore platform.

Designed for efficient and streamlined workflows, this Genophore automatically aligns protein orthologs and family members, as well as Sanger sequences to support your molecular biology and target design workflows. With over 2 billion sequence relationships, scientists can seamless find orthologs and fuel their design journey.

AI/ML-Powered Workflows

Stay Tuned for More New Tools and Integrations

Genophore is integrating advanced AI and ML tools for protein structure prediction, generative protein design, virtual screening and molecular docking. These tools are designed to work seamlessly together, while also embedded in the informatics discovery workflows. 

3D Structural Alignment

Use a plethora of 3D structural alignment tools for a comprehensive and insightful evaluation of your experimental and predicted structures. Algorithms including DeepAlign, FATCAT, Tm-Score, MM-Align and US-Align.

Biomolecule Structure Prediction

Genophore incorporates the most recent ML/AI-based models for protein and antibody structure prediction into our protein design workflows. This includes the structural predictions of proteins and nucleic acids complexes structures.  Current models in development include ESMfold, RoseTTAFold All-Atom, AlphaFold2/OpenFold, AfCycDesign, AFcluster among others.

 

Druggability Assessment and AL/ML Ligand Docking

Genophore offers advanced docking tools that provide precise and efficient prediction of molecular interactions. These tools enable researchers to identify binding pockets, explore docking poses and visualize results with lightening speed. Try DiffDock-L, which allows docking of ligands into PDB structures. Docking results can be visualized using MolX, our easy-to-use 3D molecular visualization platform.